YoVDO

Exchanging Replicas with Unequal Cost, Infinitely and Permanently

Offered By: Applied Algebraic Topology Network via YouTube

Tags

Monte Carlo Methods Courses Parallel Computing Courses Molecular Modeling Courses Computational Chemistry Courses

Course Description

Overview

Explore an advanced replica exchange method designed for effective parallelization, even when computational costs vary significantly across replicas. Delve into a paradigm shift that moves away from the traditional high-dimensional superstate concept to an ensemble-based approach, allowing for participation of different environments in Monte Carlo moves. Learn about a novel algorithm that increases exchange rates to infinity without factorial scaling, overcoming limitations in the number of replicas. Examine the application of this methodology in combination with Replica Exchange Transition Interface Sampling (RETIS), addressing challenges posed by varying path lengths and computational costs across different path ensembles. Gain insights from test results on three model systems, demonstrating the effectiveness of the newly developed ∞RETIS method in quantitative path sampling.

Syllabus

Titus van Erp (10/7/22): Exchanging replicas with unequal cost, infinitely and permanently


Taught by

Applied Algebraic Topology Network

Related Courses

Quantitative Biology Workshop
Massachusetts Institute of Technology via edX
Computer Aided Drug Design
Indian Institute of Technology Madras via Swayam
Fundamentals of Bioinformatics
Sree Neelakanta Govt. Sanskrit College via Swayam
Drug development process: combating pain
The Open University via OpenLearn
How Will Quantum Computing Change the Technology Landscape? - Bruce Davie, Systems Approach, LLC
Paul G. Allen School via YouTube