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Hands-on Introduction to Pangenome Graphs

Offered By: Computational Genomics Summer Institute CGSI via YouTube

Tags

Genomics Courses Bioinformatics Courses Computational Biology Courses Long Read Sequencing Courses

Course Description

Overview

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Dive into a hands-on introduction to pangenome graphs in this 41-minute conference talk by Rayan Chikhi at the Computational Genomics Summer Institute (CGSI). Explore the fundamental concepts and practical applications of pangenome graphs in genomics research. Learn about data structures, algorithms, and tools used in pangenome analysis, drawing insights from related papers on pangenome graphs, minimizer-space de Bruijn graphs, and computational graph pangenomics. Gain practical experience with tools like ODGI for understanding and manipulating pangenome graphs. Discover how these advanced techniques are revolutionizing whole-genome assembly and enabling more comprehensive analysis of genetic variation across populations.

Syllabus

Rayan Chikhi | Hands-on introduction to pangenome graphs


Taught by

Computational Genomics Summer Institute CGSI

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