Fun with Phecodes - From PheWAS to PheRS

Explore the world of Phecodes in this informative conference talk by Lisa Bastarache at the Computational Genomics Summer Institute (CGSI2023). Dive into the principles and applications of Phecodes, including their use in Phenowide Association Studies and phenotype risk scores. Learn about various tools and resources such as the R Package, Fee Web, and Fee Codex. Discover the importance of replicability in biobank data science and understand quality control measures. Gain insights into cross-biobanking phenotyping and the Mom Baby Database. Examine practical examples and best practices for using Phecodes in research with electronic health records, from PheWAS to PheRS.

Intro
What are Phecodes
Example of Phecodes
The principle of Phecodes
Phecodes chapters
Fun with Phecodes
Phenowide Association Studies
Minimum Code Count
R Package
Fee Web
Fee Codex
Mom Baby Database
Wrong Citation
phenotype risk scores
phenotype risk package
crossbio banking phenotyping
Fee Code Counts
Quality Control
Replicability
Replication Measures
Smokey Bear
Cleanest Example
Replication