SwissRegulon Portal - Tools and Data for Regulatory Genomics

Explore the SwissRegulon web portal and its suite of tools for regulatory genomics in this comprehensive 7-hour course. Delve into genome-wide annotations of regulatory sites and motifs, and master the use of advanced web servers and tools. Learn to utilize ISMARA for automated inference of regulatory networks, CRUNCH for efficient analysis of ChIPseq data, and REALPHY for reconstructing phylogenies from raw sequence data. Gain hands-on experience with the ChIP-Seq web server and understand the intricacies of processing transcription factor ChIP-seq data using CRUNCH. Examine ISMARA's results and interface, and develop a strong foundation in regulatory genomics principles. By the end of this course, acquire the skills to effectively navigate and leverage the SwissRegulon portal for your research in regulatory genomics.

Introduction to the ChiP-Seq web server.
CRUNCH - a tool to process transcription factor ChIP-seq data.
ISMARA: results and interface.
Introduction to regulatory genomics and ISMARA.
Introduction to regulatory genomics and ISMARA.