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Connecting Molecular Details to Macroscopic Behaviors with Thermodynamics and Information Theory

Offered By: Santa Fe Institute via YouTube

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Information Theory Courses Thermodynamics Courses Reverse Engineering Courses Molecular Biology Courses

Course Description

Overview

Explore a lecture on connecting molecular details to macroscopic behaviors using thermodynamics and information theory. Delve into Benjamin Machta's research on E. coli chemotaxis, examining how limited information rates affect gradient climbing abilities. Discover the information efficiency of E. coli's chemotaxis system and learn about ongoing work on the energetic costs of information transmission in biological systems. Investigate different strategies cells use for sending information, including ion channels and second messenger molecules, and understand the cost per bit for these methods. Gain insights into the relationship between energy consumption and information processing in biological systems, and how this knowledge can be applied to reverse-engineering approaches in biology.

Syllabus

Introduction
Molecular details
Reverse engineering
Two projects
Sensory motor control
Image compression
Overview
Running tumble navigation
Mutual information
Behavioral parameters
Information rate
Signal statistics
Information limited
Shallow gradient
Efficiency
Conclusion
Fundamental cost
Physical mechanisms
Electrical signaling


Taught by

Santa Fe Institute

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